Services running to and from the city were largely cancelled on Sunday and Monday as a result of flooding.
Northern reported this morning that the disruption, which was caused by flooding between Leeds and Shipley had now ended.
Services should no longer be affected by this problem.
As a result the services will no longer be calling at Rotherham central.
Road transport links are in operation between Rotherham, Meadowhall and Doncaster.
LNER services connecting Leeds and London Kings Cross are also returning to normal.
This is despite an early morning cancellation due to an unforeseen fault.
Tickets unable to be used over the weekend will remain valid on today's services for both Northern and LNER.
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